Recent Publications

C Sweetman, CD Waterman, DCJ Wong, DA Day, CLD Jenkins, KL Soole (2022) Front. Plant Sci. 13:876843. Altering the balance between AOX1A and NDB2 expression affects a common set of transcripts in Arabidopsis

M Kuzbakova, G Khassanova, I Oshergina, E Ten, S Jatayev, R Yerzhebayeva, K Bulatova, S Khalbayeva, C Schramm, P Anderson, C Sweetman, CLD Jenkins, KL Soole, Y Shavrukov (2022) Front. Plant Sci. 13:948099. Height to first pod: A review of genetic and breeding approaches to improve combine harvesting in legume crops.

SA Ramesh, Y Long, A Dashtbani-Roozbehani, M Gilliham, MH Brown, SD Tyerman (2022) Biology. 11(8):1162. Picrotoxin delineates different transport configurations for malate and γ-aminobutyric acid through TaALMT1.

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C Sweetman, J Selinski, TK Miller, J Whelan, DA Day (2022) Front. Plant Sci. 12:813691. Legume Alternative Oxidase Isoforms Show Differential Sensitivity to Pyruvate Activation.

SW Henderson, S Nourmohammadi, SA Ramesh, AJ Yool (2022) Biophys. Rev. 14:181-198. Aquaporin ion conductance properties defined by membrane environment, protein structure, and cell physiology.

R Kalendar, A Baidyussen, D Serikbay, L Zotova, G Khassanova, M Kuzbakova, S Jatayev, Y Hu, C Schramm, PA Anderson, CLD Jenkins, KL Soole, Y Shavrukov (2022) Front. Plant Sci. 12:747886. Modified “Allele-Specific qPCR” Method for SNP Genotyping Based on FRET.

A Baidyussen, S Jatayev, G Khassanova, B Amantayev, G Sereda, S Sereda, NK Gupta, S Gupta, C Schramm, PA Anderson, CLD Jenkins, KL Soole,P Langridge, Y Shavrukov (2021) IJMS 22(22), 12156. Expression of Specific Alleles of Zinc-Finger Transcription Factors, HvSAP8 and HvSAP16, and Corresponding SNP Markers, Are Associated with Drought Tolerance in Barley Populations.

CA Burbidge, CM Ford, VJ Melino, DCJ Wong, Y Jia, CLD Jenkins, KL Soole, SD Castellarin, P Darriet, M Rienth, C Bonghi, RP Walker, F Famiani, C Sweetman (2021) Front. Plant Sci. 12, 643024. Biosynthesis and cellular functions of tartaric acid in grapevines.

M Rienth, N Vigneron, P Darriet, C Sweetman, C Burbidge, C Bonghi, RP Walker, F Famiani, SD Castellarin (2021) Front. Plant Sci. 12, 643258. Grape berry secondary metabolites and their modulation by abiotic factors in a climate change scenario – a review.

DA Day, PMC Smith (2021) IJMS 22(1), 432. Iron transport across symbiotic membranes of nitrogen-fixing legumes.

M Kamran, SA Ramesh, M Gilliham, SD Tyerman, J Bose (2020) Plant, Cell & Environ. 43, 2443-2459. Role of TaALMT1 malate-GABA transporter in alkaline pH tolerance of wheat.

L Zotova, N Shamambaeva, K Lethola, B Alharthi, V Vavilova, SE Smolenskaya, NP Goncharov, A Kurishbayev, S Jatayev, NK Gupta, S Gupta, C Schramm, PA Anderson, CLD Jenkins, KL Soole, Y Shavrukov (2020) IJMS 21(21), 8296. TaDrAp1 and TaDrAp2, partner genes of a transcription repressor, coordinate plant development and drought tolerance in spelt and bread wheat.

A Baidyussen, M Aldammas, A Kurishbayev, M Myrzabaeva, A Zhubatkanov, G Sereda, R Porkhun, S Sereda, S Jatayev, P Langridge, C Schramm, CLD Jenkins, KL Soole, Y Shavrukov (2020) BMC Plant Biology 20, 156. Identification, gene expression and genetic polymorphism of zinc finger A20/AN1 stress-associated genes, HvSAP, in salt stressed barley from Kazakhstan.

C Sweetman, G Khassanova, TK Miller, NJ Booth, A Kurishbayev, S Jatayev, NK Gupta, P Langridge, CLD Jenkins, KL Soole, DA Day, Y Shavrukov (2020) BMC Plant Biology 20(1), 1-12. Salt-induced expression of intracellular vesicle trafficking genes, CaRab-GTP, and their association with Na+ accumulation in leaves of chickpea (Cicer arietinum L.)

S Dayer, JD Scharwies, SA Ramesh, W Sullivan, FC Doerflinger, V Pagay, SD Tyerman (2020) Front. Plant Sci. 11, 705. Comparing hydraulics between two grapevine cultivars reveals differences in stomatal regulation under water stress and exogenous ABA applications.

S Jatayev, I Sukhikh, V Vavilova, SE Smolenskaya, NP Goncharov, A Kurishbayev, L Zotova, A Absattarova, D Serikbay, Y Hu, N Borisjuk, NK Gupta, B Jacobs, S deGroot, F Koekemoer, B Alharthi, K Lethola, DT Cu, C Schramm, P Anderson, CLD Jenkins, KL Soole, Y Shavrukov (2020) Plant, Cell & Env. 43, 2355-2364. Green revolution ‘stumbles’ in a dry environment: Dwarf wheat with Rht genes fails to produce higher grain yield than taller plants under drought.

EM Brear, F Bedon, A Gavrin, IS Kryvoruchko, I Torres-Jerez, MK Udvardi, DA Day, PMC Smith (2020) New Phyt. 228(2), 667-681. GmVTL1a is an iron transporter on the symbiosome membrane of soybean with an important role in nitrogen fixation

C Sweetman, TK Miller, NJ Booth, Y Shavrukov, CLD Jenkins, KL Soole, DA Day (2020) IJMS 21(11), 3844. Identification of alternative mitochondrial electron transport pathway components in chickpea indicates a differential response to salinity stress between cultivars.

C Sweetman, CD Waterman, BM Rainbird, PMC Smith, CLD Jenkins, DA Day, KL Soole (2019). Plant Physiol. 181(2), 774-788. AtNDB2 is the main external NADH dehydrogenase in mitochondria and is important for tolerance to environmental stress.

H Burdett, B Kobe, P Anderson (2019) Arch. Biochem. & Biophys. 670, 58-68. Animal NLRs continue to inform plant NLR structure and function.

H Burdett, A Bentham, S Williams, P Dodds, P Anderson, M Banfield, B Kobe (2019) Cell Host & Microbe 26(2), 193-201. The plant “Resistosome”: structural insights into immune signaling.

R Munns, DA Day, W Fricke, M Watt, B Arsova, BJ Barkla, J Bose, CS Byrt, Z Chen, KJ Foster, M Gilliham, SW Henderson, CLD Jenkins, HJ Kronzucker, SJ Miklavcic, D Plett, SJ Roy, S Shabala, MC Shelden, KL Soole, NL Taylor, M Tester, S Wege, LH Wegner, SD Tyerman (2019) New Phyt. 225, 1072-1090. Energy costs of salt tolerance in crop plants.

C Sweetman, KL Soole, CLD Jenkins, DA Day (2019) Plant, Cell & Env. 42(1), 71. Genomic structure and expression of alternative oxidase genes in legumes.

B Akomeah, MD Quain, SA Ramesh, L Anand, CMR Lopez (2019) PLOS One 14(4), e0208214. Common garden experiment reveals altered nutritional values and DNA methylation profiles in micropropagated three elite Ghanaian sweet potato genotypes.

CC Zhao, YY Wang, KX Chan, DB Marchant, PJ Franks, D Randall, EE Tee, G Chen, S Ramesh, SY Phua, B Zhang, A Hills, F Dai, DW Xue, M Gilliham, S Tyerman, E Nevo, FB Wu, GP Zhang, GKS Wong, JH Leebens-Mack, M Melkonian, MR Blatt, PS Soltis, DE Soltis, BJ Pogson, ZH Chen (2019) PNAS 116(11), 5015-5020. Evolution of chloroplast retrograde signaling facilitates green plant adaptation to land.

C Schramm, Y Shavrukov, P Anderson, A Kurishbaev, S Jatayev (2019) Development of single nucleotide polymorphism (SNP) markers for cereal breeding and crop research: current methods and future prospects. In: Burleigh Dodds Series in Agricultural Science. Burleigh Dodds Science Publishing Ltd. Cambridge, UK.

M Utebayev, S Dashkevich, N Bome, K Bulatova, Y Shavrukov (2019) PeerJ 7:e7082. Genetic diversity of gliadin-coding alleles in bread wheat (Triticum aestivum L.) from Northern Kazakhstan.

N Borisjuk, O Kishchenko, S Eliby, C Schramm, P Anderson, S Jatayev, A Kurishbayev, Y Shavrukov (2019) BioMed Res. Int. 6216304. Genetic modification for wheat improvement: from transgenesis to genome editing.

G Khassanova, A Kurishbayev, S Jatayev, A Zhubatkanov, A Zhumalin, A Turbekova, B Amantaev, S Lopato, C Schramm, CLD Jenkins, KL Soole, P Langridge, Y Shavrukov (2019) Front. Genet. 10, 40. Intracellular vesicle trafficking genes, RabC-GTP, are highly expressed under salinity and rapid dehydration but down-regulated by drought in leaves of chickpea (Cicer arietinum L.).

L Zotova, A Kurishbayev, S Jatayev, NP Goncharov, N Shamambayeva, A Kashapov, A Nuralov, A Otemissova, S Sereda, V Shvidchenko, S Lopato, C Schramm, CLD Jenkins, KL Soole, P Langridge, Y Shavrukov (2019) Front. Genet. 10, 63. The general transcription repressor TaDr1 is co-expressed with TaVrn1 and TaFT1 in bread wheat under drought.

M Utebayev, S Dashkevich, K Kunanbayev, N Bome, B Sharipova, Y Shavrukov (2019) Acta Physiol. Plant. 41, 71. Genetic polymorphism of glutenin subunits with high molecular weight and their role in grain and dough qualities of spring bread wheat (Triticum aestivum L.) from Northern Kazakhstan.

K Bulatova, S Mazkirat, S Didorenko, D Babissekova, M Kudaibergenov, P Alchinbayeva, S Khalbayeva, Y Shavrukov (2019) Agronomy 9(2), 76. Trypsin inhibitor assessment with biochemical and molecular markers in a soybean germplasm collection and hybrid populations for seed quality improvement.

VR Wanniarachchi, L Dametto, C Sweetman, Y Shavrukov, DA Day, CLD Jenkins, KL Soole (2018) IJMS 19(3), 915. Alternative respiratory pathway component genes (AOX and ND) in rice and barley and their response to stress.

BM Rainbird, RH Bentham, KL Soole (2018) Int. J. Phytoremed. 20(2), 104-113. Rhizoremediation of residual sulfonylurea herbicides in agricultural soils using Lens culinaris and a commercial supplement.

J Selinski, R Scheibe, DA Day, J Whelan (2018) TIPS 23(7), 588-597. Alternative oxidase is positive for plant performance.

L Zotova, A Kurishbayev, S Jatayev, G Khassanova, A Zhubatkanov, D Serikbay, S Sereda, T Sereda, V Shvidchenko, S Lopato, CLD Jenkins, KL Soole, P Langridge, Y Shavrukov (2018) Front. Plant Sci. 9, 1441. Genes encoding transcription factors TaDREB5 and TaNFYC-A7 are differentially expressed in leaves of bread wheat in response to drought, dehydration and ABA.

R Yerzhebayeva, A Abekova, K Konysbekov, S Bastaubayeva, A Kabdrakhmanova, A Absattarova, Y Shavrukov (2018) PeerJ 6:e5127. Two sugar beet chitinase genes, BvSP2 and BvSE2, analysed with SNP Amplifluor-like markers, are highly expressed after Fusarium root rot inoculations and field susceptibility trial.

T Absattar, A Absattarova, N Fillipova, A Otemissova, Y Shavrukov (2018) Mol. Breed. 38, 37. Diversity array technology (DArT) 56K analysis, confirmed by SNP markers, distinguishes one crested wheatgrass Agropyron species from two others found in Kazakhstan.

J Selinski, A Hartmann, G Deckers-Hebestreit, DA Day, J Whelan, R Scheibe (2018) Plant Physiol. 176(2), 1423-1432. Alternative oxidase isoforms are differentially activated by tricarboxylic acid cycle intermediates

SA Ramesh, M Kamran, W Sullivan, L Chirkova, M okamoto, F Degryse, M McLaughlin, M Gilliham, SD Tyerman (2018) Plant Cell 30(5), 1147-1164. Aluminium-activated transporters can facilitate GABA transport.